已测序真核生物基因组列表

已测序真核生物基因组列表包括所有已知的，可以公开获取已组装、注释和发表的细胞核和细胞器基因组序列的真核生物；基因组草图不包括在内，只有细胞器序列的物种也不包括。

1977年，第一次出现DNA测序。1995年，细菌流感嗜血杆菌第一个完成了全基因组序列。1996年，酿酒酵母是第一个发布的真核生物基因组序列。1998年，发布了第一个多细胞真核生物基因组序列，秀丽隐杆线虫。

原生生物

以下是最早的5个完成基因组测序的原生生物。更完整的列表，请参阅已测序原生生物基因组列表。

植物

以下是最早的5个完成基因组测序的植物，更完整的列表，请参阅已测序植物基因组列表

物种学名	类型	关联	基因组大小	预测的基因数	机构	完成年份
Arabidopsis thaliana 生态型:哥伦比亚	拟南芥	模式植物	119 Mb	25,498,^[1]27,400,^[2]31,670 (UniProt)	Arabidopsis Genome Initiative^[3]	2000^[1]
Cyanidioschyzon merolae Strain:10D	红藻	单细胞真核生物	16.5 Mb	5,331^[4]	University of Tokyo, Rikkyo University, Saitama University and Kumamoto University	2004^[4]
Oryza sativassp ssp indica	大米	Crop and model organism	420 Mb	32-50,000^[5]	Beijing Genomics Institute、浙江大学、中国科学院	2002^[5]
Ostreococcus tauri	绿藻	单细胞真核生物，基因组较小	12.6 Mb	7,969 (UniProt)	Laboratoire Arago	2006^[6]
Populus trichocarpa	Balsam poplar or Black Cottonwood	固碳模式植物，商业木材and comparison to A. thaliana	550 Mb	45,555^[7]	The International Poplar Genome Consortium	2006^[7]

真菌

以下是最早的5个完成基因组测序的真菌，更完整的列表，请参阅已测序真菌基因组列表。

物种	纲	意义	基因组大小	预测基因数目	完成机构	完成年份
酿酒酵母 Saccharomyces cerevisiae 品系：S288C	酵母菌纲	用于酿造啤酒的酵母；常用的模式生物	12.1 Mb	6,294^[8]	大规模国际合作项目^[9]	1996^[8]
家兔脑胞内原虫 Encephalitozoon cuniculi	微孢子虫纲	人类病原体	2.9 Mb	1,997^[10]	Genoscope和Université Blaise Pascal	2001^[10]
粟酒裂殖酵母 Schizosaccharomyces pombe 品系：972h-	裂殖酵母纲	模式生物	14 Mb	4,824^[11]	桑格研究所和冷泉港实验室	2002^[11]
粉色面包霉菌 Neurospora crassa	粪壳菌纲	模式生物	40 Mb	10,082^[12]	Broad Institute、俄勒冈健康与科学大学、肯塔基大学和堪萨斯大学	2003^[12]
黄孢原毛平革菌 Phanerochaete chrysosporium 品系：RP78	伞菌纲	木材腐朽真菌；常用于真菌修复	30Mb	11,777^[13]	Joint Genome Institute	2004^[13]

动物

以下是最早的5个完成基因组测序的动物，更完整的列表，请参阅已测序动物基因组列表。

参见

参考资料

↑ ^1.0 ^1.1 The Arabidopsis Genome Initiative,. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature. 2000-12, 408 (6814): 796–815. PMID 11130711. doi:10.1038/35048692.
↑ Ensembl entry. [2012-03-08].
↑ Arabidopsis Genome Initiative
↑ ^4.0 ^4.1 Matsuzaki M; Misumi O; Shin-I T; et al. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Nature. 2004-04, 428 (6983): 653–7. Bibcode:2004Natur.428..653M. PMID 15071595. doi:10.1038/nature02398. 已忽略未知参数|author-separator= (帮助)
↑ ^5.0 ^5.1 Goff SA; Ricke D; Lan TH; et al. A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science. 2002-04, 296 (5565): 92–100. Bibcode:2002Sci...296...92G. PMID 11935018. doi:10.1126/science.1068275. 已忽略未知参数|author-separator= (帮助)
↑ Derelle E; Ferraz C; Rombauts S; et al. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. PNAS. 2006-08, 103 (31): 11647–52. Bibcode:2006PNAS..10311647D. PMC 1544224 . PMID 16868079. doi:10.1073/pnas.0604795103. 已忽略未知参数|author-separator= (帮助)
↑ ^7.0 ^7.1 Tuskan GA, Difazio S, Jansson S; et al. The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science. 2006-09, 313 (5793): 1596–604. Bibcode:2006Sci...313.1596T. PMID 16973872. doi:10.1126/science.1128691.
↑ ^8.0 ^8.1 Goffeau A, Barrell BG, Bussey H, et al. Life with 6000 genes. Science. 1996-10, 274 (5287): 546, 563–7. Bibcode:1996Sci...274..546G. PMID 8849441. doi:10.1126/science.274.5287.546.
↑ International Collaboration for the Yeast Genome Sequencing
↑ ^10.0 ^10.1 Katinka MD, Duprat S, Cornillot E, et al. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Nature. 2001-11, 414 (6862): 450–3. PMID 11719806. doi:10.1038/35106579.
↑ ^11.0 ^11.1 Wood V, Gwilliam R, Rajandream MA, et al. The genome sequence of Schizosaccharomyces pombe. Nature. 2002-02, 415 (6874): 871–80. PMID 11859360. doi:10.1038/nature724.
↑ ^12.0 ^12.1 Galagan JE, Calvo SE, Borkovich KA, et al. The genome sequence of the filamentous fungus Neurospora crassa. Nature. 2003-04, 422 (6934): 859–68. Bibcode:2003Natur.422..859G. PMID 12712197. doi:10.1038/nature01554.
↑ ^13.0 ^13.1 Martinez, Diego; Larrondo, Luis F; Putnam, Nik; Gelpke, Maarten D Sollewijn; Huang, Katherine; Chapman, Jarrod; Helfenbein, Kevin G; Ramaiya, Preethi; et al. Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nature Biotechnology. 2004, 22 (6): 695–700. PMID 15122302. doi:10.1038/nbt967.

外部链接

Diark - a resource for eukaryotic genome research
EMBL-EBL Eukaryotic Genomes
UCSC Genome Browser
International Sequencing Consortium - Large-scale Sequencing Project Database
Ensembl The Ensembl Genome Browser (includes draft and low coverage genomes)
Fungal Genome Initiative (includes draft genomes)
GOLD:Genomes OnLine Database v 3.0
SUPERFAMILY comparative genomics database Includes genomes of all completely sequenced eukaryotes, and sophisticated datamining plus visualisation tools for analysis
Rat Genome Database

[Arab-1] 1.0 ^1.1 The Arabidopsis Genome Initiative,. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature. 2000-12, 408 (6814): 796–815. PMID 11130711. doi:10.1038/35048692.

[2] Ensembl entry. [2012-03-08].

[3] Arabidopsis Genome Initiative

[Matsuzaki-4] 4.0 ^4.1 Matsuzaki M; Misumi O; Shin-I T; et al. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Nature. 2004-04, 428 (6983): 653–7. Bibcode:2004Natur.428..653M. PMID 15071595. doi:10.1038/nature02398. 已忽略未知参数|author-separator= (帮助)

[Goff-5] 5.0 ^5.1 Goff SA; Ricke D; Lan TH; et al. A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science. 2002-04, 296 (5565): 92–100. Bibcode:2002Sci...296...92G. PMID 11935018. doi:10.1126/science.1068275. 已忽略未知参数|author-separator= (帮助)

[6] Derelle E; Ferraz C; Rombauts S; et al. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. PNAS. 2006-08, 103 (31): 11647–52. Bibcode:2006PNAS..10311647D. PMC 1544224 . PMID 16868079. doi:10.1073/pnas.0604795103. 已忽略未知参数|author-separator= (帮助)

[Tuskan-7] 7.0 ^7.1 Tuskan GA, Difazio S, Jansson S; et al. The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science. 2006-09, 313 (5793): 1596–604. Bibcode:2006Sci...313.1596T. PMID 16973872. doi:10.1126/science.1128691.

[Goffeau-8] 8.0 ^8.1 Goffeau A, Barrell BG, Bussey H, et al. Life with 6000 genes. Science. 1996-10, 274 (5287): 546, 563–7. Bibcode:1996Sci...274..546G. PMID 8849441. doi:10.1126/science.274.5287.546.

[9] International Collaboration for the Yeast Genome Sequencing

[Katinka-10] 10.0 ^10.1 Katinka MD, Duprat S, Cornillot E, et al. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Nature. 2001-11, 414 (6862): 450–3. PMID 11719806. doi:10.1038/35106579.

[Wood-11] 11.0 ^11.1 Wood V, Gwilliam R, Rajandream MA, et al. The genome sequence of Schizosaccharomyces pombe. Nature. 2002-02, 415 (6874): 871–80. PMID 11859360. doi:10.1038/nature724.

[Galagan-12] 12.0 ^12.1 Galagan JE, Calvo SE, Borkovich KA, et al. The genome sequence of the filamentous fungus Neurospora crassa. Nature. 2003-04, 422 (6934): 859–68. Bibcode:2003Natur.422..859G. PMID 12712197. doi:10.1038/nature01554.

[martinez-13] 13.0 ^13.1 Martinez, Diego; Larrondo, Luis F; Putnam, Nik; Gelpke, Maarten D Sollewijn; Huang, Katherine; Chapman, Jarrod; Helfenbein, Kevin G; Ramaiya, Preethi; et al. Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nature Biotechnology. 2004, 22 (6): 695–700. PMID 15122302. doi:10.1038/nbt967.

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